Plots DIABLO output — diablo

Displays the samples coordinates for a given latent component across the datasets. This is a copy of the plotDiablo function, the only difference is that the margins have been increased to accomodate for a title.

Usage

diablo_plot(
  diablo_res,
  ncomp = 1,
  legend = TRUE,
  legend.ncol,
  col.per.group = NULL
)

Arguments

diablo_res: The output from block.splsda or diablo_run.
ncomp: Integer, the latent component to plot.
legend: Logical, should the legend be added to the plot? Default value is TRUE.
legend.ncol: Integer, the number of columns for the legend. If none specified, will be calculated as min(5, nlevels(diablo_res$Y)).
col.per.group: Named character vector, provides the colours to use for each phenotypic group. Names must match the levels of diablo_res$Y.

Value

None.