Reduce feature sets to match multi-omics dataset

Removes from a list of feature sets all features that are not present in the multi-omics dataset.

Usage

reduce_feature_sets_data(feature_sets, mo_data, datasets = names(mo_data))

Arguments

feature_sets

Named list, where each element corresponds to a feature set, and contains a vector of features ID of all features belonging to that set.

mo_data

A MultiDataSet-class object.

datasets

Character vector, the names of the datasets for which features assignment should be checked. By default, all datasets in mo_data are considered.

Value

A feature sets list, i.e. named list where each element corresponds to a feature set, containing the ID of all features that belong to this set and that are present in the multi-omics dataset.