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Makes list of feature sets from data-frame

Source: R/methods_evaluation.R
make_feature_sets_from_df.Rd

Creates a list of feature sets from an annotation data-frame.

Usage

make_feature_sets_from_df(annotation_df, col_id, col_set)

Arguments

annotation_df

A data-frame of feature annotation in long format, with at least a column of feature ID and a column giving the set to which the feature belongs. If a feature belongs to more than one set, there should be a row for each of these sets.

col_id

Character, name of the column in annotation_df data-frame that contains the features ID.

col_set

Character, name of the column annotation_df data-frame that contains the sets ID.

Value

a named list, where each element corresponds to a set, and contains a vector of features ID of all features belonging to that set.