Checks features assignment to sets

Checks proportion of features from a multi-omics dataset that are assigned to feature sets.

Usage

check_feature_sets(feature_sets, mo_data, datasets = names(mo_data))

Arguments

feature_sets

Named list, where each element corresponds to a feature set, and contains a vector of features ID of all features belonging to that set.

mo_data

A MultiDataSet-class object.

datasets

Character vector, the names of the datasets for which features assignment should be checked. By default, all datasets in mo_data are considered.

Value

A tibble giving for each dataset the number and fraction of features that are assigned to at least one feature set. The message column is meant to facilitate reporting.